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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015828322.1_cds_XP_016503389.1_16938
CDS Infomation

[gene=LOC107821468] [db_xref=GeneID:107821468] [protein=serine--tRNA ligase, chloroplastic/mitochondrial-like isoform X2] [protein_id=XP_016503389.1] [location=join(26485..26533,26611..26759,26841..26933,27687..27866,28608..28774,29124..29258,29384..29477,29701..29976)] [gbkey=CDS]
Sequence

ATGAAAGGAAAGCTGGAACCCTCAGAGCGCCAGAAGCTCATAGAAGAAGGAAAGAATTTG
AAGGAAGCACTTGTGACTTTGGAAGAAGACTTGCTCAAACTTACAGATGAGCTGCAGCAA
GAAGCACAATCGGTACCTAATATTACACATCCAGATGTTCCAGTTGGAGGGGAAGATTCT
TCAACAGTCAGGAAAATGGTTGGTAAACCTGCAGAGTTTAGCTTTGCTGTTAAAGACCAC
GTCCAGCTGGGAAAAGAGCTAGATTTGTTTGATTTTGACGCTGCTGCTGAGGTCAGTGGG
TCCAAATTCTATTACTTGAAGAATGAAGCAGTTACTTTAGAGATGGCTCTTGTAAACTGG
GCAGTTTCAGAAGCCATGAAACGAGGCTTTACACCTCTGACTACCCCAGAGATTGTTCGG
TCATCTGTGGTGGAAAAATGTGGATTTCAACCCCGTGGAACAAACACTCAGGTTTACTCC
ATTGAAAATAGTGACCAGTGCCTGATTGGAACCGCTGAGATTCCAGTAGGTGGAATACAC
ATGGATTCCATTCTTTCCGAGTCTTCATTGCCATTGAAATATGTGGCTTTCTCACACTGC
TTTCGGACTGAGGCTGGTGCTGCAGGCGCTGCAACAAGGGGACTTTATCGGGTTCACCAG
TTCAGCAAGGTGGAAATGTTCATACTGTGCCGACCAGACGAGAGTGATTCATACCATGAA
GAACTCATTGAGATCGAAGAAGACCTCTTCTCGTCACTAGGATTTCATTTCAAGACATTG
GACATGGCATCCCAAGATCTAGGTGCACCAGCTTATCGTAAGTTTGATGTGGAGGCCTGG
ATGCCAGGGTTGGGCCGTTATGGTGAGATATCAAGTGCATCAAATTGTACAGATTATCAA
AGCCGTCGGCTGGGAATTAGGTATCGCCCTGAACCATCAGCGTCAAGTCCTAAAAAGGGT
AAAAACGCAGCTCCAACACAGTTCGTTCACACACTAAATGCTACAGCATGTGCAGTTCCA
CGAATGATAGTGTGCTTGCTTGAGAATTTCCAGCAAGAAGATGGCTCAGTTATTATACCA
GAGCCACTGAGGCCTTACATGGGGGGGCTTCAGATTATTAAACCAAAACATATACAGAAC
TAA

Peptide Sequence

PEP ID

XP_016503389.1
PEP Infomation

PREDICTED: serine--tRNA ligase, chloroplastic/mitochondrial-like isoform X2 [Nicotiana tabacum]
Sequence

MKGKLEPSERQKLIEEGKNLKEALVTLEEDLLKLTDELQQEAQSVPNITHPDVPVGGEDS
STVRKMVGKPAEFSFAVKDHVQLGKELDLFDFDAAAEVSGSKFYYLKNEAVTLEMALVNW
AVSEAMKRGFTPLTTPEIVRSSVVEKCGFQPRGTNTQVYSIENSDQCLIGTAEIPVGGIH
MDSILSESSLPLKYVAFSHCFRTEAGAAGAATRGLYRVHQFSKVEMFILCRPDESDSYHE
ELIEIEEDLFSSLGFHFKTLDMASQDLGAPAYRKFDVEAWMPGLGRYGEISSASNCTDYQ
SRRLGIRYRPEPSASSPKKGKNAAPTQFVHTLNATACAVPRMIVCLLENFQQEDGSVIIP
EPLRPYMGGLQIIKPKHIQN

Transcript Sequence

Gene sequence data has not been registered.